Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF144AP50876 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC7.89□□□□□ -1.15
RNF144AP50876 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF144AP50876 TTTY6-201ENST00000253838 491 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF144AP50876 TTTY6B-201ENST00000253848 491 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 KRTAP11-1-201ENST00000332378 912 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RNF144AP50876 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF144AP50876 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 MIR185-201ENST00000385288 82 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 TRAV35-201ENST00000390462 330 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 Y_RNA.582-201ENST00000391023 95 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 CAPNS1P1-201ENST00000401029 633 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 GLRX3P2-201ENST00000405027 1038 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 AL513302.1-201ENST00000415679 428 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 ZRANB2-AS2-203ENST00000415780 249 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF144AP50876 AC007359.1-201ENST00000417910 745 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 AC013429.2-201ENST00000418798 781 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC7.89□□□□□ -1.15
RNF144AP50876 AC008175.1-202ENST00000439653 745 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 ZEB1-AS1-203ENST00000441257 585 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF144AP50876 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 AC242426.2-201ENST00000446956 795 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 DPPA3P1-201ENST00000448050 469 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 LINC02037-201ENST00000455821 1195 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF144AP50876 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
RNF144AP50876 MTND6P6-201ENST00000478031 263 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 RPS10P16-201ENST00000483812 496 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF144AP50876 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF144AP50876 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF144AP50876 AP004245.1-201ENST00000530434 259 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 AC128707.1-202ENST00000548963 693 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF144AP50876 AC121758.1-202ENST00000556917 658 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 AP007216.1-201ENST00000563932 385 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 RN7SL118P-201ENST00000580570 302 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 AC007952.7-201ENST00000583141 757 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 AL135999.3-201ENST00000610501 812 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.89□□□□□ -1.15
RNF144AP50876 USP12-203ENST00000620323 349 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF144AP50876 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF144AP50876 AC007326.3-201ENST00000636418 176 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 LINC01739-205ENST00000641890 573 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 AL512504.2-201ENST00000445455 1909 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF144AP50876 ABCF2P1-201ENST00000465687 1867 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RNF144AP50876 FBXW7-204ENST00000393956 1735 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF144AP50876 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
RNF144AP50876 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF144AP50876 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF144AP50876 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF144AP50876 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
RNF144AP50876 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF144AP50876 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
RNF144AP50876 NR1I3-205ENST00000367983 1473 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF144AP50876 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF144AP50876 AL390728.4-201ENST00000421406 1465 ntBASIC7.88□□□□□ -1.15
RNF144AP50876 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC7.88□□□□□ -1.15
RNF144AP50876 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF144AP50876 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC7.88□□□□□ -1.15
RNF144AP50876 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF144AP50876 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC7.88□□□□□ -1.15
RNF144AP50876 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF144AP50876 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
RNF144AP50876 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF144AP50876 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF144AP50876 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF144AP50876 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF144AP50876 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF144AP50876 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RNF144AP50876 COX17P1-201ENST00000378775 192 ntBASIC7.88□□□□□ -1.15
RNF144AP50876 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF144AP50876 EIF4A1P8-201ENST00000394444 1190 ntBASIC7.88□□□□□ -1.15
RNF144AP50876 CNN2P7-201ENST00000400583 932 ntBASIC7.88□□□□□ -1.15
RNF144AP50876 AL590004.1-201ENST00000405321 300 ntBASIC7.88□□□□□ -1.15
RNF144AP50876 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF144AP50876 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms