Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AF121897.1-201ENST00000411867 3980 ntBASIC7.73□□□□□ -1.17
POLR2AP24928 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.73□□□□□ -1.17
POLR2AP24928 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.73□□□□□ -1.17
POLR2AP24928 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC7.73□□□□□ -1.17
POLR2AP24928 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
POLR2AP24928 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
POLR2AP24928 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.73□□□□□ -1.17
POLR2AP24928 MIR1178-201ENST00000408396 91 ntBASIC7.73□□□□□ -1.17
POLR2AP24928 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.73□□□□□ -1.17
POLR2AP24928 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.73□□□□□ -1.17
POLR2AP24928 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
POLR2AP24928 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.73□□□□□ -1.17
POLR2AP24928 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.73□□□□□ -1.17
POLR2AP24928 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC7.73□□□□□ -1.17
POLR2AP24928 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
POLR2AP24928 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.73□□□□□ -1.17
POLR2AP24928 AC092332.1-201ENST00000563684 829 ntBASIC7.73□□□□□ -1.17
POLR2AP24928 TMF1P1-201ENST00000576058 373 ntBASIC7.73□□□□□ -1.17
POLR2AP24928 GTF2IP6-201ENST00000583143 541 ntBASIC7.73□□□□□ -1.17
POLR2AP24928 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.73□□□□□ -1.17
POLR2AP24928 AL512624.1-201ENST00000613638 469 ntBASIC7.73□□□□□ -1.17
POLR2AP24928 AL512652.1-201ENST00000619006 500 ntBASIC7.73□□□□□ -1.17
POLR2AP24928 AC073488.3-201ENST00000631611 778 ntBASIC7.73□□□□□ -1.17
POLR2AP24928 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.73□□□□□ -1.17
POLR2AP24928 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
POLR2AP24928 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.73□□□□□ -1.17
POLR2AP24928 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
POLR2AP24928 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.73□□□□□ -1.17
POLR2AP24928 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
POLR2AP24928 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.73□□□□□ -1.17
POLR2AP24928 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
POLR2AP24928 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.73□□□□□ -1.17
POLR2AP24928 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
POLR2AP24928 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
POLR2AP24928 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
POLR2AP24928 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.72□□□□□ -1.17
POLR2AP24928 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC7.72□□□□□ -1.17
POLR2AP24928 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.72□□□□□ -1.17
POLR2AP24928 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
POLR2AP24928 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.72□□□□□ -1.17
POLR2AP24928 RNA5SP242-201ENST00000364171 118 ntBASIC7.72□□□□□ -1.17
POLR2AP24928 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.72□□□□□ -1.17
POLR2AP24928 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.72□□□□□ -1.17
POLR2AP24928 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 AC023141.9-201ENST00000458734 412 ntBASIC7.72□□□□□ -1.17
POLR2AP24928 RPL5P14-201ENST00000494197 878 ntBASIC7.72□□□□□ -1.17
POLR2AP24928 AC063943.2-201ENST00000495697 534 ntBASIC7.72□□□□□ -1.17
POLR2AP24928 AC021220.1-201ENST00000507445 630 ntBASIC7.72□□□□□ -1.17
POLR2AP24928 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.72□□□□□ -1.17
POLR2AP24928 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.72□□□□□ -1.17
POLR2AP24928 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.72□□□□□ -1.17
POLR2AP24928 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC7.72□□□□□ -1.17
POLR2AP24928 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 AC027575.3-201ENST00000583058 2747 ntBASIC7.72□□□□□ -1.17
POLR2AP24928 AL355974.1-201ENST00000618896 1708 ntBASIC7.72□□□□□ -1.17
POLR2AP24928 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
POLR2AP24928 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC7.72□□□□□ -1.17
POLR2AP24928 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC7.72□□□□□ -1.17
POLR2AP24928 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
POLR2AP24928 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.72□□□□□ -1.17
POLR2AP24928 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.71□□□□□ -1.17
POLR2AP24928 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
POLR2AP24928 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
POLR2AP24928 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.71□□□□□ -1.17
POLR2AP24928 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.71□□□□□ -1.17
POLR2AP24928 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.71□□□□□ -1.17
POLR2AP24928 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.71□□□□□ -1.17
POLR2AP24928 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC7.71□□□□□ -1.17
POLR2AP24928 PTTG3P-201ENST00000521862 606 ntBASIC7.71□□□□□ -1.17
POLR2AP24928 MRPS21P8-201ENST00000569196 235 ntBASIC7.71□□□□□ -1.17
POLR2AP24928 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.71□□□□□ -1.17
POLR2AP24928 AC010463.3-201ENST00000594077 500 ntBASIC7.71□□□□□ -1.17
POLR2AP24928 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
POLR2AP24928 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
POLR2AP24928 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
POLR2AP24928 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
POLR2AP24928 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.71□□□□□ -1.17
POLR2AP24928 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.71□□□□□ -1.17
POLR2AP24928 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
POLR2AP24928 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
POLR2AP24928 SMG1P5-202ENST00000529428 4219 ntBASIC7.71□□□□□ -1.17
POLR2AP24928 SMG1P2-201ENST00000566127 4221 ntBASIC7.71□□□□□ -1.17
POLR2AP24928 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.71□□□□□ -1.17
POLR2AP24928 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
POLR2AP24928 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
POLR2AP24928 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
POLR2AP24928 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
POLR2AP24928 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms