Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3-BMI1R4GMX3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 EDA-201ENST00000338901 1233 ntBASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3-BMI1R4GMX3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 AC005224.4-201ENST00000583262 1652 ntBASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COMMD3-BMI1R4GMX3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 AC110285.6-201ENST00000617652 491 ntBASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD3-BMI1R4GMX3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms