Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.71■■□□□ 1.23
CLIC4Q9Y696 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
CLIC4Q9Y696 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CLIC4Q9Y696 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CLIC4Q9Y696 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.71■■□□□ 1.23
CLIC4Q9Y696 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CLIC4Q9Y696 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.71■■□□□ 1.23
CLIC4Q9Y696 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.71■■□□□ 1.23
CLIC4Q9Y696 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CLIC4Q9Y696 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
CLIC4Q9Y696 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
CLIC4Q9Y696 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.23
CLIC4Q9Y696 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CLIC4Q9Y696 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CLIC4Q9Y696 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CLIC4Q9Y696 MIR663A-201ENST00000385250 93 ntBASIC22.7■■□□□ 1.22
CLIC4Q9Y696 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.7■■□□□ 1.22
CLIC4Q9Y696 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CLIC4Q9Y696 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.7■■□□□ 1.22
CLIC4Q9Y696 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CLIC4Q9Y696 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CLIC4Q9Y696 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CLIC4Q9Y696 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.7■■□□□ 1.22
CLIC4Q9Y696 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CLIC4Q9Y696 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CLIC4Q9Y696 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CLIC4Q9Y696 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 MKRN4P-201ENST00000444706 1521 ntBASIC22.69■■□□□ 1.22
CLIC4Q9Y696 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 LSM12P1-201ENST00000411836 588 ntBASIC22.69■■□□□ 1.22
CLIC4Q9Y696 AC026185.1-201ENST00000445748 174 ntBASIC22.69■■□□□ 1.22
CLIC4Q9Y696 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 AC093484.2-201ENST00000580996 2166 ntBASIC22.69■■□□□ 1.22
CLIC4Q9Y696 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLIC4Q9Y696 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 HLA-G-202ENST00000376815 851 ntBASIC22.68■■□□□ 1.22
CLIC4Q9Y696 HLA-G-203ENST00000376818 1127 ntBASIC22.68■■□□□ 1.22
CLIC4Q9Y696 GPX1P1-201ENST00000388829 606 ntBASIC22.68■■□□□ 1.22
CLIC4Q9Y696 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 AF201337.1-201ENST00000520239 748 ntBASIC22.68■■□□□ 1.22
CLIC4Q9Y696 AC023632.3-201ENST00000521633 145 ntBASIC22.68■■□□□ 1.22
CLIC4Q9Y696 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CLIC4Q9Y696 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLIC4Q9Y696 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CLIC4Q9Y696 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLIC4Q9Y696 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CLIC4Q9Y696 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.67■■□□□ 1.22
CLIC4Q9Y696 BX276092.2-201ENST00000417668 665 ntBASIC22.67■■□□□ 1.22
CLIC4Q9Y696 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLIC4Q9Y696 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLIC4Q9Y696 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLIC4Q9Y696 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.67■■□□□ 1.22
CLIC4Q9Y696 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.67■■□□□ 1.22
CLIC4Q9Y696 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 AC087289.5-201ENST00000586076 3175 ntBASIC22.66■■□□□ 1.22
CLIC4Q9Y696 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLIC4Q9Y696 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms