Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 AL691432.2-201ENST00000607222 2038 ntBASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 CROCCP5-201ENST00000436658 830 ntBASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA11Q9Y5H2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 KRT16P6-202ENST00000425692 1426 ntBASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 HLA-G-202ENST00000376815 851 ntBASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 HLA-G-203ENST00000376818 1127 ntBASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA11Q9Y5H2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 AC006970.2-201ENST00000450065 779 ntBASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 AC023632.3-201ENST00000521633 145 ntBASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 AL121832.2-201ENST00000610979 668 ntBASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGA11Q9Y5H2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 TMEM179-206ENST00000616017 1645 ntBASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 BX276092.2-201ENST00000417668 665 ntBASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.23■□□□□ 0.67
PCDHGA11Q9Y5H2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms