Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP4S1Q9Y587 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP4S1Q9Y587 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.77■□□□□ 0.59
AP4S1Q9Y587 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP4S1Q9Y587 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.76■□□□□ 0.59
AP4S1Q9Y587 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 AC233992.3-201ENST00000607491 485 ntBASIC18.76■□□□□ 0.59
AP4S1Q9Y587 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.76■□□□□ 0.59
AP4S1Q9Y587 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 AC009237.14-201ENST00000609975 1594 ntBASIC18.75■□□□□ 0.59
AP4S1Q9Y587 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP4S1Q9Y587 KRT16P2-201ENST00000414673 1423 ntBASIC18.74■□□□□ 0.59
AP4S1Q9Y587 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
AP4S1Q9Y587 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
AP4S1Q9Y587 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP4S1Q9Y587 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP4S1Q9Y587 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
AP4S1Q9Y587 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.73■□□□□ 0.59
AP4S1Q9Y587 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP4S1Q9Y587 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms