Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PKP3Q9Y446 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.97■□□□□ 0.79
PKP3Q9Y446 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.97■□□□□ 0.79
PKP3Q9Y446 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.97■□□□□ 0.79
PKP3Q9Y446 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.97■□□□□ 0.79
PKP3Q9Y446 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.97■□□□□ 0.79
PKP3Q9Y446 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PKP3Q9Y446 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PKP3Q9Y446 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PKP3Q9Y446 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PKP3Q9Y446 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.96■□□□□ 0.79
PKP3Q9Y446 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.96■□□□□ 0.79
PKP3Q9Y446 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.96■□□□□ 0.79
PKP3Q9Y446 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.96■□□□□ 0.79
PKP3Q9Y446 PNMA6B-201ENST00000538162 1200 ntBASIC19.96■□□□□ 0.79
PKP3Q9Y446 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.96■□□□□ 0.79
PKP3Q9Y446 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.96■□□□□ 0.79
PKP3Q9Y446 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.96■□□□□ 0.79
PKP3Q9Y446 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.96■□□□□ 0.79
PKP3Q9Y446 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
PKP3Q9Y446 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP3Q9Y446 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
PKP3Q9Y446 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP3Q9Y446 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
PKP3Q9Y446 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PKP3Q9Y446 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP3Q9Y446 AC112907.3-201ENST00000577781 2400 ntBASIC19.95■□□□□ 0.78
PKP3Q9Y446 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP3Q9Y446 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.95■□□□□ 0.78
PKP3Q9Y446 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PKP3Q9Y446 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP3Q9Y446 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.95■□□□□ 0.78
PKP3Q9Y446 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.95■□□□□ 0.78
PKP3Q9Y446 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.95■□□□□ 0.78
PKP3Q9Y446 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PKP3Q9Y446 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PKP3Q9Y446 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PKP3Q9Y446 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PKP3Q9Y446 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.95■□□□□ 0.78
PKP3Q9Y446 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PKP3Q9Y446 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PKP3Q9Y446 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PKP3Q9Y446 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PKP3Q9Y446 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP3Q9Y446 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PKP3Q9Y446 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PKP3Q9Y446 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.94■□□□□ 0.78
PKP3Q9Y446 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.94■□□□□ 0.78
PKP3Q9Y446 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.94■□□□□ 0.78
PKP3Q9Y446 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.94■□□□□ 0.78
PKP3Q9Y446 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PKP3Q9Y446 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP3Q9Y446 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP3Q9Y446 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PKP3Q9Y446 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP3Q9Y446 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP3Q9Y446 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP3Q9Y446 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.94■□□□□ 0.78
PKP3Q9Y446 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.94■□□□□ 0.78
PKP3Q9Y446 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PKP3Q9Y446 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP3Q9Y446 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP3Q9Y446 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PKP3Q9Y446 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP3Q9Y446 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP3Q9Y446 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP3Q9Y446 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.93■□□□□ 0.78
PKP3Q9Y446 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PKP3Q9Y446 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.93■□□□□ 0.78
PKP3Q9Y446 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.93■□□□□ 0.78
PKP3Q9Y446 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.93■□□□□ 0.78
PKP3Q9Y446 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.93■□□□□ 0.78
PKP3Q9Y446 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.93■□□□□ 0.78
PKP3Q9Y446 AC006557.6-201ENST00000623071 864 ntBASIC19.93■□□□□ 0.78
PKP3Q9Y446 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.93■□□□□ 0.78
PKP3Q9Y446 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PKP3Q9Y446 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP3Q9Y446 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP3Q9Y446 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP3Q9Y446 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PKP3Q9Y446 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms