Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC25.2■■□□□ 1.62
RTCBQ9Y3I0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC25.2■■□□□ 1.62
RTCBQ9Y3I0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
RTCBQ9Y3I0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.2■■□□□ 1.62
RTCBQ9Y3I0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RTCBQ9Y3I0 AL049796.1-201ENST00000565336 1766 ntBASIC25.2■■□□□ 1.62
RTCBQ9Y3I0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
RTCBQ9Y3I0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC25.2■■□□□ 1.62
RTCBQ9Y3I0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 COPE-203ENST00000351079 907 ntTSL 2 BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 HMGA1P5-201ENST00000412453 271 ntBASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 YBX1P10-201ENST00000444752 975 ntBASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 NMU-205ENST00000511469 756 ntTSL 3 BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 SLC25A1P4-201ENST00000567977 778 ntBASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
RTCBQ9Y3I0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 AC091390.4-202ENST00000476426 537 ntBASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 AC130371.2-201ENST00000619443 611 ntBASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 MYC-208ENST00000641036 567 ntBASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 AC116351.2-201ENST00000606540 1585 ntBASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.18■■□□□ 1.62
RTCBQ9Y3I0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 FAM8A6P-201ENST00000407496 1135 ntBASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 TUBB8P6-201ENST00000436895 1288 ntBASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 KRT18P16-201ENST00000510337 1294 ntBASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 AL121603.2-201ENST00000557373 2117 ntBASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 AP000692.2-201ENST00000608391 879 ntBASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 TFP1-202ENST00000475455 1573 ntBASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.17■■□□□ 1.62
RTCBQ9Y3I0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
RTCBQ9Y3I0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.16■■□□□ 1.62
RTCBQ9Y3I0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTCBQ9Y3I0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.16■■□□□ 1.62
RTCBQ9Y3I0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTCBQ9Y3I0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC25.16■■□□□ 1.62
RTCBQ9Y3I0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RTCBQ9Y3I0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.16■■□□□ 1.62
RTCBQ9Y3I0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.16■■□□□ 1.62
RTCBQ9Y3I0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.16■■□□□ 1.62
RTCBQ9Y3I0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.16■■□□□ 1.62
RTCBQ9Y3I0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC25.16■■□□□ 1.62
RTCBQ9Y3I0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 AL024507.2-201ENST00000606070 2574 ntBASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 HIST1H2APS4-201ENST00000362070 348 ntBASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 AC139887.4-201ENST00000607877 719 ntBASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 AL138966.2-201ENST00000621997 464 ntBASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
RTCBQ9Y3I0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms