Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 EDA-201ENST00000338901 1233 ntBASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 CCDC92B-201ENST00000575506 885 ntBASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.78■□□□□ 0.44
EXOSC1Q9Y3B2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 PBX2P1-201ENST00000493219 1291 ntBASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXOSC1Q9Y3B2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.77■□□□□ 0.43
EXOSC1Q9Y3B2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
EXOSC1Q9Y3B2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
EXOSC1Q9Y3B2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EXOSC1Q9Y3B2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EXOSC1Q9Y3B2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EXOSC1Q9Y3B2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
EXOSC1Q9Y3B2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EXOSC1Q9Y3B2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
EXOSC1Q9Y3B2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
EXOSC1Q9Y3B2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 AC091305.1-201ENST00000479476 895 ntBASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EXOSC1Q9Y3B2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 RBM17P2-201ENST00000616397 1405 ntBASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 IRS3P-201ENST00000223076 1006 ntBASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 MIR939-201ENST00000401314 82 ntBASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 AC097381.1-201ENST00000429019 1296 ntBASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 CDV3P1-201ENST00000471403 739 ntBASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 KRT18P20-201ENST00000548986 1279 ntBASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 AP001160.3-201ENST00000601484 763 ntBASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
EXOSC1Q9Y3B2 AL138781.2-201ENST00000617896 1843 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms