Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 AC068880.1-201ENST00000507289 2297 ntBASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 AC092171.4-201ENST00000609130 632 ntBASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 AC087239.1-201ENST00000622671 572 ntBASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH1Q9Y2L9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH1Q9Y2L9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 AC096631.2-201ENST00000436136 790 ntBASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.85■□□□□ 0.61
LRCH1Q9Y2L9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 DUX4L19-201ENST00000557448 1267 ntBASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH1Q9Y2L9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.83■□□□□ 0.61
LRCH1Q9Y2L9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRCH1Q9Y2L9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRCH1Q9Y2L9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRCH1Q9Y2L9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRCH1Q9Y2L9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.83■□□□□ 0.61
LRCH1Q9Y2L9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.83■□□□□ 0.61
LRCH1Q9Y2L9 AC019069.1-201ENST00000610008 1333 ntBASIC18.83■□□□□ 0.61
LRCH1Q9Y2L9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRCH1Q9Y2L9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms