Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 B3GAT3P1-201ENST00000471720 806 ntBASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 FEM1AP4-201ENST00000443167 1987 ntBASIC30.85■■■□□ 2.53
CDK11AQ9UQ88 STK25-204ENST00000405585 1643 ntTSL 2 BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 RNF146-204ENST00000476956 884 ntTSL 2 BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 KRT18P16-201ENST00000510337 1294 ntBASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
CDK11AQ9UQ88 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC30.83■■■□□ 2.53
CDK11AQ9UQ88 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC30.83■■■□□ 2.53
CDK11AQ9UQ88 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
CDK11AQ9UQ88 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
CDK11AQ9UQ88 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC30.83■■■□□ 2.53
CDK11AQ9UQ88 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CDK11AQ9UQ88 EGLN1P1-201ENST00000531623 762 ntBASIC30.83■■■□□ 2.53
CDK11AQ9UQ88 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC30.83■■■□□ 2.53
CDK11AQ9UQ88 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC30.83■■■□□ 2.53
CDK11AQ9UQ88 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC30.83■■■□□ 2.53
CDK11AQ9UQ88 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CDK11AQ9UQ88 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC30.83■■■□□ 2.53
CDK11AQ9UQ88 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC30.82■■■□□ 2.53
CDK11AQ9UQ88 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 TSPY14P-201ENST00000303979 915 ntBASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 DUX4L26-201ENST00000489078 1255 ntBASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC30.82■■■□□ 2.52
CDK11AQ9UQ88 KRT16P6-202ENST00000425692 1426 ntBASIC30.81■■■□□ 2.52
CDK11AQ9UQ88 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC30.81■■■□□ 2.52
CDK11AQ9UQ88 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDK11AQ9UQ88 AC079834.2-201ENST00000609776 1949 ntBASIC30.81■■■□□ 2.52
CDK11AQ9UQ88 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CDK11AQ9UQ88 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDK11AQ9UQ88 AC004980.1-204ENST00000429707 299 ntBASIC30.81■■■□□ 2.52
CDK11AQ9UQ88 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
CDK11AQ9UQ88 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CDK11AQ9UQ88 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDK11AQ9UQ88 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDK11AQ9UQ88 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDK11AQ9UQ88 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC30.8■■■□□ 2.52
CDK11AQ9UQ88 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDK11AQ9UQ88 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CDK11AQ9UQ88 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDK11AQ9UQ88 AC104076.2-201ENST00000448912 469 ntBASIC30.8■■■□□ 2.52
CDK11AQ9UQ88 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC30.8■■■□□ 2.52
CDK11AQ9UQ88 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC30.8■■■□□ 2.52
CDK11AQ9UQ88 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC30.8■■■□□ 2.52
CDK11AQ9UQ88 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC30.8■■■□□ 2.52
CDK11AQ9UQ88 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 DPP3P2-201ENST00000416030 1696 ntBASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 TUBB8P6-201ENST00000436895 1288 ntBASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 AC011506.1-201ENST00000474329 610 ntBASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 AC010203.1-204ENST00000548782 407 ntBASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 AC131212.4-201ENST00000623606 975 ntBASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDK11AQ9UQ88 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC30.78■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms