Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 AC007613.1-201ENST00000572811 2597 ntBASIC17.71■□□□□ 0.43
SSR3Q9UNL2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.71■□□□□ 0.43
SSR3Q9UNL2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SSR3Q9UNL2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 AL512631.2-201ENST00000604634 923 ntBASIC17.7■□□□□ 0.42
SSR3Q9UNL2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 KRT8P36-201ENST00000489121 1440 ntBASIC17.7■□□□□ 0.42
SSR3Q9UNL2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR3Q9UNL2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.69■□□□□ 0.42
SSR3Q9UNL2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 BX842568.3-201ENST00000418104 571 ntBASIC17.69■□□□□ 0.42
SSR3Q9UNL2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSR3Q9UNL2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.68■□□□□ 0.42
SSR3Q9UNL2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms