Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 SNORA78-201ENST00000459373 127 ntBASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 AC027702.1-201ENST00000563810 1770 ntBASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA1Q9UND3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPA1Q9UND3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPA1Q9UND3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
NPIPA1Q9UND3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.33■□□□□ 0.53
NPIPA1Q9UND3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.33■□□□□ 0.53
NPIPA1Q9UND3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
NPIPA1Q9UND3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.33■□□□□ 0.53
NPIPA1Q9UND3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 AC239809.2-201ENST00000415381 517 ntBASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 AC073314.1-201ENST00000568729 2216 ntBASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPA1Q9UND3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 AP005212.1-201ENST00000581547 1997 ntBASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 GABARAPL3-202ENST00000624044 1851 ntBASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA1Q9UND3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 AC124016.1-201ENST00000609552 612 ntBASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NPIPA1Q9UND3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms