Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 AL050303.2-201ENST00000619798 666 ntBASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 AC133041.1-202ENST00000642053 222 ntBASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 BID-203ENST00000399765 1879 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00474Q9P2X8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 AC097658.1-201ENST00000475555 843 ntBASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00474Q9P2X8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 ID1-201ENST00000376105 1233 ntBASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00474Q9P2X8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms