Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.57■■□□□ 1.2
COL20A1Q9P218 FAM197Y1-201ENST00000421178 764 ntBASIC22.57■■□□□ 1.2
COL20A1Q9P218 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL20A1Q9P218 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.57■■□□□ 1.2
COL20A1Q9P218 BX088651.1-201ENST00000540551 451 ntBASIC22.57■■□□□ 1.2
COL20A1Q9P218 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.57■■□□□ 1.2
COL20A1Q9P218 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
COL20A1Q9P218 MIR4785-201ENST00000585005 73 ntBASIC22.57■■□□□ 1.2
COL20A1Q9P218 CD177P1-201ENST00000606252 935 ntBASIC22.57■■□□□ 1.2
COL20A1Q9P218 AC004264.1-201ENST00000608354 794 ntBASIC22.57■■□□□ 1.2
COL20A1Q9P218 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
COL20A1Q9P218 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
COL20A1Q9P218 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL20A1Q9P218 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL20A1Q9P218 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL20A1Q9P218 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL20A1Q9P218 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL20A1Q9P218 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL20A1Q9P218 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.57■■□□□ 1.2
COL20A1Q9P218 KRT17P2-201ENST00000300992 1314 ntBASIC22.57■■□□□ 1.2
COL20A1Q9P218 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.56■■□□□ 1.2
COL20A1Q9P218 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.56■■□□□ 1.2
COL20A1Q9P218 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL20A1Q9P218 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL20A1Q9P218 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.56■■□□□ 1.2
COL20A1Q9P218 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.56■■□□□ 1.2
COL20A1Q9P218 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.56■■□□□ 1.2
COL20A1Q9P218 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.56■■□□□ 1.2
COL20A1Q9P218 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL20A1Q9P218 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL20A1Q9P218 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL20A1Q9P218 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL20A1Q9P218 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.56■■□□□ 1.2
COL20A1Q9P218 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.56■■□□□ 1.2
COL20A1Q9P218 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL20A1Q9P218 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
COL20A1Q9P218 BX119927.1-201ENST00000636596 1552 ntBASIC22.55■■□□□ 1.2
COL20A1Q9P218 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
COL20A1Q9P218 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.55■■□□□ 1.2
COL20A1Q9P218 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.55■■□□□ 1.2
COL20A1Q9P218 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.55■■□□□ 1.2
COL20A1Q9P218 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.55■■□□□ 1.2
COL20A1Q9P218 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.55■■□□□ 1.2
COL20A1Q9P218 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.55■■□□□ 1.2
COL20A1Q9P218 AC026471.5-201ENST00000615068 467 ntBASIC22.55■■□□□ 1.2
COL20A1Q9P218 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
COL20A1Q9P218 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.55■■□□□ 1.2
COL20A1Q9P218 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL20A1Q9P218 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL20A1Q9P218 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL20A1Q9P218 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL20A1Q9P218 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL20A1Q9P218 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL20A1Q9P218 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL20A1Q9P218 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL20A1Q9P218 AP005212.1-201ENST00000581547 1997 ntBASIC22.54■■□□□ 1.2
COL20A1Q9P218 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL20A1Q9P218 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.54■■□□□ 1.2
COL20A1Q9P218 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL20A1Q9P218 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL20A1Q9P218 PHGDH-210ENST00000641115 1638 ntBASIC22.53■■□□□ 1.2
COL20A1Q9P218 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL20A1Q9P218 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL20A1Q9P218 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL20A1Q9P218 AP006587.1-201ENST00000534129 1502 ntBASIC22.53■■□□□ 1.2
COL20A1Q9P218 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL20A1Q9P218 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
COL20A1Q9P218 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.53■■□□□ 1.2
COL20A1Q9P218 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
COL20A1Q9P218 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL20A1Q9P218 AL353807.1-201ENST00000427475 662 ntBASIC22.53■■□□□ 1.2
COL20A1Q9P218 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL20A1Q9P218 AL353708.3-201ENST00000610272 989 ntBASIC22.53■■□□□ 1.2
COL20A1Q9P218 REXO1L12P-201ENST00000622156 912 ntBASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms