Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPAQ9P0L0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPAQ9P0L0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VAPAQ9P0L0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPAQ9P0L0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPAQ9P0L0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPAQ9P0L0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPAQ9P0L0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VAPAQ9P0L0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.79■□□□□ 0.6
VAPAQ9P0L0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
VAPAQ9P0L0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.79■□□□□ 0.6
VAPAQ9P0L0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.79■□□□□ 0.6
VAPAQ9P0L0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 AC007322.4-201ENST00000509611 723 ntBASIC18.78■□□□□ 0.6
VAPAQ9P0L0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAPAQ9P0L0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.77■□□□□ 0.6
VAPAQ9P0L0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.77■□□□□ 0.6
VAPAQ9P0L0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
VAPAQ9P0L0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
VAPAQ9P0L0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VAPAQ9P0L0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
VAPAQ9P0L0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
VAPAQ9P0L0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 KRT16P6-202ENST00000425692 1426 ntBASIC18.76■□□□□ 0.59
VAPAQ9P0L0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 AL031963.3-201ENST00000606441 850 ntBASIC18.76■□□□□ 0.59
VAPAQ9P0L0 AC013268.1-206ENST00000638368 961 ntBASIC18.76■□□□□ 0.59
VAPAQ9P0L0 AC112229.1-201ENST00000639295 961 ntBASIC18.76■□□□□ 0.59
VAPAQ9P0L0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAPAQ9P0L0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 AL032819.2-201ENST00000624543 2162 ntBASIC18.75■□□□□ 0.59
VAPAQ9P0L0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 NTF6G-201ENST00000591094 616 ntBASIC18.75■□□□□ 0.59
VAPAQ9P0L0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VAPAQ9P0L0 KRT8P20-201ENST00000423953 1409 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms