Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
TREM2Q9NZC2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.34
TREM2Q9NZC2 AL158211.5-201ENST00000623583 2518 ntBASIC17.14■□□□□ 0.33
TREM2Q9NZC2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 AC092720.2-201ENST00000602388 1665 ntBASIC17.14■□□□□ 0.33
TREM2Q9NZC2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TREM2Q9NZC2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 KRT8P36-201ENST00000489121 1440 ntBASIC17.13■□□□□ 0.33
TREM2Q9NZC2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 AC092368.3-202ENST00000574180 1591 ntBASIC17.13■□□□□ 0.33
TREM2Q9NZC2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.13■□□□□ 0.33
TREM2Q9NZC2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 UNC93B5-201ENST00000530315 699 ntBASIC17.12■□□□□ 0.33
TREM2Q9NZC2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TREM2Q9NZC2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREM2Q9NZC2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms