Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 AC011270.2-201ENST00000624293 2550 ntBASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 AC092296.2-201ENST00000589470 999 ntBASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMCO4Q9NRQ5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
SMCO4Q9NRQ5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SMCO4Q9NRQ5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMCO4Q9NRQ5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 GFER-205ENST00000569451 517 ntTSL 5 BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.62■□□□□ 0.09
SMCO4Q9NRQ5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.61■□□□□ 0.09
SMCO4Q9NRQ5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.61■□□□□ 0.09
SMCO4Q9NRQ5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SMCO4Q9NRQ5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.61■□□□□ 0.09
SMCO4Q9NRQ5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SMCO4Q9NRQ5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMCO4Q9NRQ5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms