Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TLR9Q9NR96 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TLR9Q9NR96 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TLR9Q9NR96 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TLR9Q9NR96 Z98882.1-201ENST00000622160 2253 ntBASIC21.16■□□□□ 0.98
TLR9Q9NR96 FBXW4P1-201ENST00000426721 2239 ntBASIC21.16■□□□□ 0.98
TLR9Q9NR96 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TLR9Q9NR96 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TLR9Q9NR96 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
TLR9Q9NR96 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.16■□□□□ 0.98
TLR9Q9NR96 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.16■□□□□ 0.98
TLR9Q9NR96 DUX4L26-201ENST00000489078 1255 ntBASIC21.16■□□□□ 0.98
TLR9Q9NR96 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
TLR9Q9NR96 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.16■□□□□ 0.98
TLR9Q9NR96 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.16■□□□□ 0.98
TLR9Q9NR96 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.16■□□□□ 0.98
TLR9Q9NR96 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TLR9Q9NR96 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.16■□□□□ 0.98
TLR9Q9NR96 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TLR9Q9NR96 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TLR9Q9NR96 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TLR9Q9NR96 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.15■□□□□ 0.98
TLR9Q9NR96 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
TLR9Q9NR96 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TLR9Q9NR96 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TLR9Q9NR96 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TLR9Q9NR96 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TLR9Q9NR96 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TLR9Q9NR96 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TLR9Q9NR96 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TLR9Q9NR96 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TLR9Q9NR96 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.15■□□□□ 0.98
TLR9Q9NR96 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.15■□□□□ 0.98
TLR9Q9NR96 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TLR9Q9NR96 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.15■□□□□ 0.98
TLR9Q9NR96 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TLR9Q9NR96 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TLR9Q9NR96 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TLR9Q9NR96 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TLR9Q9NR96 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TLR9Q9NR96 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.14■□□□□ 0.98
TLR9Q9NR96 FSCN1P1-201ENST00000568912 1481 ntBASIC21.14■□□□□ 0.98
TLR9Q9NR96 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.14■□□□□ 0.98
TLR9Q9NR96 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TLR9Q9NR96 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TLR9Q9NR96 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.14■□□□□ 0.97
TLR9Q9NR96 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.14■□□□□ 0.97
TLR9Q9NR96 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.14■□□□□ 0.97
TLR9Q9NR96 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.14■□□□□ 0.97
TLR9Q9NR96 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
TLR9Q9NR96 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.14■□□□□ 0.97
TLR9Q9NR96 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TLR9Q9NR96 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR9Q9NR96 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TLR9Q9NR96 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR9Q9NR96 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR9Q9NR96 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR9Q9NR96 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR9Q9NR96 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.13■□□□□ 0.97
TLR9Q9NR96 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR9Q9NR96 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.13■□□□□ 0.97
TLR9Q9NR96 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR9Q9NR96 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.13■□□□□ 0.97
TLR9Q9NR96 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
TLR9Q9NR96 C1QL1P1-201ENST00000568105 661 ntBASIC21.13■□□□□ 0.97
TLR9Q9NR96 AC026271.3-201ENST00000571884 352 ntBASIC21.13■□□□□ 0.97
TLR9Q9NR96 NTF6B-201ENST00000591913 560 ntBASIC21.13■□□□□ 0.97
TLR9Q9NR96 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR9Q9NR96 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR9Q9NR96 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TLR9Q9NR96 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.13■□□□□ 0.97
TLR9Q9NR96 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR9Q9NR96 AL049796.1-201ENST00000565336 1766 ntBASIC21.13■□□□□ 0.97
TLR9Q9NR96 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.12■□□□□ 0.97
TLR9Q9NR96 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TLR9Q9NR96 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TLR9Q9NR96 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TLR9Q9NR96 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.12■□□□□ 0.97
TLR9Q9NR96 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TLR9Q9NR96 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TLR9Q9NR96 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TLR9Q9NR96 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TLR9Q9NR96 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TLR9Q9NR96 AC104076.2-201ENST00000448912 469 ntBASIC21.12■□□□□ 0.97
TLR9Q9NR96 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.12■□□□□ 0.97
TLR9Q9NR96 C2orf69P3-201ENST00000565542 1120 ntBASIC21.12■□□□□ 0.97
TLR9Q9NR96 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.12■□□□□ 0.97
TLR9Q9NR96 AP006587.1-201ENST00000534129 1502 ntBASIC21.12■□□□□ 0.97
TLR9Q9NR96 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TLR9Q9NR96 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
TLR9Q9NR96 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.12■□□□□ 0.97
TLR9Q9NR96 KRT8P17-201ENST00000453110 1448 ntBASIC21.12■□□□□ 0.97
TLR9Q9NR96 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.12■□□□□ 0.97
TLR9Q9NR96 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.12■□□□□ 0.97
TLR9Q9NR96 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TLR9Q9NR96 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TLR9Q9NR96 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms