Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
KCNMB3Q9NPA1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 KRT18P29-201ENST00000397031 1267 ntBASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 RN7SL471P-201ENST00000580476 299 ntBASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.39■■□□□ 1.17
KCNMB3Q9NPA1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 TFP1-202ENST00000475455 1573 ntBASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.38■■□□□ 1.17
KCNMB3Q9NPA1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 AC098590.1-201ENST00000468126 897 ntBASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.37■■□□□ 1.17
KCNMB3Q9NPA1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 TMEM191A-211ENST00000637163 1067 ntBASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNMB3Q9NPA1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNMB3Q9NPA1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms