Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 FAM21FP-204ENST00000608637 956 ntBASIC17.32■□□□□ 0.36
ELL3Q9HB65 AC011767.1-201ENST00000617410 1153 ntBASIC17.32■□□□□ 0.36
ELL3Q9HB65 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ELL3Q9HB65 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ELL3Q9HB65 DPP3P2-201ENST00000416030 1696 ntBASIC17.32■□□□□ 0.36
ELL3Q9HB65 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ELL3Q9HB65 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ELL3Q9HB65 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.31■□□□□ 0.36
ELL3Q9HB65 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.31■□□□□ 0.36
ELL3Q9HB65 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ELL3Q9HB65 RBM17P2-201ENST00000616397 1405 ntBASIC17.31■□□□□ 0.36
ELL3Q9HB65 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ELL3Q9HB65 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ELL3Q9HB65 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.31■□□□□ 0.36
ELL3Q9HB65 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ELL3Q9HB65 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ELL3Q9HB65 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ELL3Q9HB65 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ELL3Q9HB65 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ELL3Q9HB65 AC091799.1-201ENST00000422823 811 ntBASIC17.31■□□□□ 0.36
ELL3Q9HB65 CDV3P1-201ENST00000471403 739 ntBASIC17.31■□□□□ 0.36
ELL3Q9HB65 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.31■□□□□ 0.36
ELL3Q9HB65 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.31■□□□□ 0.36
ELL3Q9HB65 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.31■□□□□ 0.36
ELL3Q9HB65 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ELL3Q9HB65 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ELL3Q9HB65 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ELL3Q9HB65 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ELL3Q9HB65 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.31■□□□□ 0.36
ELL3Q9HB65 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
ELL3Q9HB65 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.31■□□□□ 0.36
ELL3Q9HB65 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ELL3Q9HB65 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ELL3Q9HB65 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ELL3Q9HB65 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.3■□□□□ 0.36
ELL3Q9HB65 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.3■□□□□ 0.36
ELL3Q9HB65 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.3■□□□□ 0.36
ELL3Q9HB65 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ELL3Q9HB65 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.3■□□□□ 0.36
ELL3Q9HB65 AC004911.1-201ENST00000416316 871 ntBASIC17.3■□□□□ 0.36
ELL3Q9HB65 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.3■□□□□ 0.36
ELL3Q9HB65 AC006015.1-201ENST00000429970 570 ntBASIC17.3■□□□□ 0.36
ELL3Q9HB65 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ELL3Q9HB65 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ELL3Q9HB65 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ELL3Q9HB65 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.3■□□□□ 0.36
ELL3Q9HB65 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ELL3Q9HB65 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.3■□□□□ 0.36
ELL3Q9HB65 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ELL3Q9HB65 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ELL3Q9HB65 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ELL3Q9HB65 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.3■□□□□ 0.36
ELL3Q9HB65 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
ELL3Q9HB65 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ELL3Q9HB65 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ELL3Q9HB65 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.29■□□□□ 0.36
ELL3Q9HB65 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.29■□□□□ 0.36
ELL3Q9HB65 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ELL3Q9HB65 MFSD11-216ENST00000590393 1141 ntBASIC17.29■□□□□ 0.36
ELL3Q9HB65 AC243732.1-201ENST00000612648 864 ntBASIC17.29■□□□□ 0.36
ELL3Q9HB65 AC092666.2-201ENST00000613287 246 ntBASIC17.29■□□□□ 0.36
ELL3Q9HB65 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ELL3Q9HB65 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ELL3Q9HB65 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.29■□□□□ 0.36
ELL3Q9HB65 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ELL3Q9HB65 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ELL3Q9HB65 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.29■□□□□ 0.36
ELL3Q9HB65 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ELL3Q9HB65 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ELL3Q9HB65 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ELL3Q9HB65 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ELL3Q9HB65 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ELL3Q9HB65 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ELL3Q9HB65 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.29■□□□□ 0.36
ELL3Q9HB65 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.28■□□□□ 0.36
ELL3Q9HB65 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ELL3Q9HB65 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ELL3Q9HB65 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ELL3Q9HB65 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ELL3Q9HB65 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ELL3Q9HB65 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ELL3Q9HB65 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ELL3Q9HB65 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ELL3Q9HB65 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ELL3Q9HB65 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.28■□□□□ 0.36
ELL3Q9HB65 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ELL3Q9HB65 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.28■□□□□ 0.36
ELL3Q9HB65 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ELL3Q9HB65 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ELL3Q9HB65 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms