Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 POU5F1P3-201ENST00000428824 1078 ntBASIC21.01■□□□□ 0.95
LHX5Q9H2C1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
LHX5Q9H2C1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21■□□□□ 0.95
LHX5Q9H2C1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21■□□□□ 0.95
LHX5Q9H2C1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21■□□□□ 0.95
LHX5Q9H2C1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21■□□□□ 0.95
LHX5Q9H2C1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21■□□□□ 0.95
LHX5Q9H2C1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21■□□□□ 0.95
LHX5Q9H2C1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21■□□□□ 0.95
LHX5Q9H2C1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21■□□□□ 0.95
LHX5Q9H2C1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
LHX5Q9H2C1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LHX5Q9H2C1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21■□□□□ 0.95
LHX5Q9H2C1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21■□□□□ 0.95
LHX5Q9H2C1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LHX5Q9H2C1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21■□□□□ 0.95
LHX5Q9H2C1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21■□□□□ 0.95
LHX5Q9H2C1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.99■□□□□ 0.95
LHX5Q9H2C1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX5Q9H2C1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 AC116351.2-201ENST00000606540 1585 ntBASIC20.98■□□□□ 0.95
LHX5Q9H2C1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.98■□□□□ 0.95
LHX5Q9H2C1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.97■□□□□ 0.95
LHX5Q9H2C1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 AC120498.8-201ENST00000614275 531 ntBASIC20.97■□□□□ 0.95
LHX5Q9H2C1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.97■□□□□ 0.95
LHX5Q9H2C1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 AC125437.2-201ENST00000625180 2167 ntBASIC20.96■□□□□ 0.95
LHX5Q9H2C1 AFG3L1P-217ENST00000557444 2447 ntBASIC20.96■□□□□ 0.95
LHX5Q9H2C1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 AC018553.1-201ENST00000616682 1458 ntBASIC20.96■□□□□ 0.95
LHX5Q9H2C1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX5Q9H2C1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms