Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.65■□□□□ 0.9
RNF38Q9H0F5 TSPY15P-201ENST00000457163 923 ntBASIC20.65■□□□□ 0.9
RNF38Q9H0F5 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF38Q9H0F5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF38Q9H0F5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF38Q9H0F5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF38Q9H0F5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF38Q9H0F5 KRT17P2-201ENST00000300992 1314 ntBASIC20.64■□□□□ 0.89
RNF38Q9H0F5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF38Q9H0F5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RNF38Q9H0F5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF38Q9H0F5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF38Q9H0F5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF38Q9H0F5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF38Q9H0F5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF38Q9H0F5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF38Q9H0F5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF38Q9H0F5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF38Q9H0F5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 AC004264.1-201ENST00000608354 794 ntBASIC20.63■□□□□ 0.89
RNF38Q9H0F5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF38Q9H0F5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 KRT16P6-202ENST00000425692 1426 ntBASIC20.62■□□□□ 0.89
RNF38Q9H0F5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF38Q9H0F5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 AC116351.2-201ENST00000606540 1585 ntBASIC20.61■□□□□ 0.89
RNF38Q9H0F5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 REXO1L12P-201ENST00000622156 912 ntBASIC20.61■□□□□ 0.89
RNF38Q9H0F5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RNF38Q9H0F5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF38Q9H0F5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF38Q9H0F5 TFP1-202ENST00000475455 1573 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms