Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXP3Q9BZS1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXP3Q9BZS1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 AC098818.2-201ENST00000564925 2320 ntBASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 AC098934.4-201ENST00000564127 592 ntBASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 RNF165-205ENST00000588679 2904 ntBASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 AL020996.1-203ENST00000536896 2307 ntBASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXP3Q9BZS1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 AC009237.14-201ENST00000609975 1594 ntBASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXP3Q9BZS1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 AC069152.1-201ENST00000438030 544 ntBASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 MIR4651-201ENST00000582622 73 ntBASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 AC093484.2-201ENST00000580996 2166 ntBASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
FOXP3Q9BZS1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
FOXP3Q9BZS1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms