Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 LINC02228-203ENST00000641970 1355 ntBASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-1Q9BYR8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 CROCCP3-202ENST00000420820 1947 ntBASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 KRT8P17-201ENST00000453110 1448 ntBASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-1Q9BYR8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 CDV3P1-201ENST00000471403 739 ntBASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 TESC-206ENST00000541210 936 ntTSL 3 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 TERF1P2-201ENST00000583350 1212 ntBASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms