Protein–RNA interactions for Protein: Q9BYD9

ACTRT3, Actin-related protein T3, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT3Q9BYD9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACTRT3Q9BYD9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACTRT3Q9BYD9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 SLC29A4P1-201ENST00000398760 971 ntBASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 NCF1B-203ENST00000435988 1254 ntBASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.53■□□□□ 0.56
ACTRT3Q9BYD9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 AP001271.2-201ENST00000624018 1556 ntBASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 AC092666.2-201ENST00000613287 246 ntBASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 AC092118.2-201ENST00000613495 667 ntBASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ACTRT3Q9BYD9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ACTRT3Q9BYD9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ACTRT3Q9BYD9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ACTRT3Q9BYD9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 PHGDH-210ENST00000641115 1638 ntBASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 DUSP5P2-201ENST00000426873 1033 ntBASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 GUSBP6-202ENST00000438529 1198 ntBASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 TSPY6P-201ENST00000448518 926 ntBASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTRT3Q9BYD9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms