Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 WWOX-216ENST00000569818 525 ntBASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 AC011506.1-201ENST00000474329 610 ntBASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 C2orf69P3-201ENST00000565542 1120 ntBASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 AP006587.1-201ENST00000534129 1502 ntBASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.29■■□□□ 1.48
RTFDC1Q9BY42 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RTFDC1Q9BY42 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTFDC1Q9BY42 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.28■■□□□ 1.48
RTFDC1Q9BY42 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
RTFDC1Q9BY42 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.28■■□□□ 1.48
RTFDC1Q9BY42 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
RTFDC1Q9BY42 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.28■■□□□ 1.48
RTFDC1Q9BY42 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
RTFDC1Q9BY42 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.28■■□□□ 1.48
RTFDC1Q9BY42 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RTFDC1Q9BY42 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
RTFDC1Q9BY42 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.28■■□□□ 1.48
RTFDC1Q9BY42 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 AC004980.1-204ENST00000429707 299 ntBASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTFDC1Q9BY42 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 ECEL1P2-202ENST00000465689 757 ntBASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 AL121603.2-201ENST00000557373 2117 ntBASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 AF106564.1-201ENST00000607058 2553 ntBASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTFDC1Q9BY42 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 AC087388.1-201ENST00000571370 1112 ntBASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTFDC1Q9BY42 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.24■■□□□ 1.47
RTFDC1Q9BY42 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.24■■□□□ 1.47
RTFDC1Q9BY42 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTFDC1Q9BY42 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.24■■□□□ 1.47
RTFDC1Q9BY42 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTFDC1Q9BY42 PLK5-205ENST00000642079 1969 ntBASIC24.24■■□□□ 1.47
RTFDC1Q9BY42 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RTFDC1Q9BY42 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTFDC1Q9BY42 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RTFDC1Q9BY42 KRT18P16-201ENST00000510337 1294 ntBASIC24.24■■□□□ 1.47
RTFDC1Q9BY42 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.24■■□□□ 1.47
RTFDC1Q9BY42 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms