Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSBP3Q9BWW4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SSBP3Q9BWW4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSBP3Q9BWW4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSBP3Q9BWW4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSBP3Q9BWW4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSBP3Q9BWW4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 AC239809.2-201ENST00000415381 517 ntBASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 UBE2SP1-201ENST00000450587 669 ntBASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 MTDHP1-201ENST00000605323 784 ntBASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSBP3Q9BWW4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 AIRN-201ENST00000601203 4374 ntBASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 KRT8P17-201ENST00000453110 1448 ntBASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 AL121906.2-201ENST00000621597 723 ntBASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.57■□□□□ 0.24
SSBP3Q9BWW4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 AL023875.1-201ENST00000640777 796 ntBASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSBP3Q9BWW4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms