Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF2Q99496 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RNF2Q99496 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF2Q99496 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF2Q99496 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF2Q99496 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF2Q99496 UBE2DNL-204ENST00000602536 740 ntBASIC15.78■□□□□ 0.12
RNF2Q99496 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF2Q99496 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RNF2Q99496 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RNF2Q99496 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF2Q99496 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF2Q99496 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
RNF2Q99496 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF2Q99496 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF2Q99496 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF2Q99496 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF2Q99496 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF2Q99496 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF2Q99496 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
RNF2Q99496 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RNF2Q99496 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF2Q99496 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF2Q99496 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF2Q99496 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF2Q99496 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RNF2Q99496 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF2Q99496 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF2Q99496 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RNF2Q99496 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.77■□□□□ 0.12
RNF2Q99496 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF2Q99496 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF2Q99496 AC137761.2-201ENST00000561729 223 ntBASIC15.77■□□□□ 0.12
RNF2Q99496 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF2Q99496 AC145350.3-201ENST00000569033 163 ntBASIC15.77■□□□□ 0.12
RNF2Q99496 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.77■□□□□ 0.12
RNF2Q99496 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF2Q99496 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF2Q99496 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF2Q99496 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF2Q99496 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RNF2Q99496 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF2Q99496 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
RNF2Q99496 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF2Q99496 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
RNF2Q99496 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF2Q99496 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF2Q99496 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RNF2Q99496 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RNF2Q99496 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF2Q99496 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF2Q99496 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF2Q99496 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF2Q99496 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF2Q99496 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF2Q99496 AC116050.2-201ENST00000612102 1779 ntBASIC15.76■□□□□ 0.11
RNF2Q99496 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF2Q99496 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF2Q99496 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF2Q99496 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF2Q99496 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF2Q99496 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF2Q99496 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.75■□□□□ 0.11
RNF2Q99496 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF2Q99496 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF2Q99496 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF2Q99496 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF2Q99496 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RNF2Q99496 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RNF2Q99496 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
RNF2Q99496 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RNF2Q99496 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RNF2Q99496 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms