Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.56■□□□□ 0.56
MS4A4EQ96PG1 AC009237.14-201ENST00000609975 1594 ntBASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 AP001271.2-201ENST00000624018 1556 ntBASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 AC091874.3-201ENST00000512672 1195 ntBASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MS4A4EQ96PG1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 PHGDH-210ENST00000641115 1638 ntBASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MS4A4EQ96PG1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 AL390719.1-204ENST00000412397 1219 ntBASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.53■□□□□ 0.56
MS4A4EQ96PG1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 AC073210.2-201ENST00000430369 194 ntBASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 AC090192.1-201ENST00000517740 490 ntBASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 AL109923.1-201ENST00000618799 583 ntBASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 AC125437.2-201ENST00000625180 2167 ntBASIC18.52■□□□□ 0.56
MS4A4EQ96PG1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.52■□□□□ 0.55
MS4A4EQ96PG1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MS4A4EQ96PG1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms