Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC073648.6-201ENST00000641589 218 ntBASIC18.76■□□□□ 0.59
PTCHD1Q96NR3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD1Q96NR3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD1Q96NR3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD1Q96NR3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.76■□□□□ 0.59
PTCHD1Q96NR3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD1Q96NR3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.76■□□□□ 0.59
PTCHD1Q96NR3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PTCHD1Q96NR3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD1Q96NR3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 RPS2P52-201ENST00000469610 820 ntBASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD1Q96NR3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 AL391422.3-201ENST00000603791 2761 ntBASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 SLC25A24-204ENST00000569674 2357 ntBASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 KRT16P6-202ENST00000425692 1426 ntBASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.73■□□□□ 0.59
PTCHD1Q96NR3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 PRORSD1P-201ENST00000295112 541 ntBASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 AC069544.1-201ENST00000609399 999 ntBASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 AL512408.1-201ENST00000569378 2000 ntBASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.72■□□□□ 0.59
PTCHD1Q96NR3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.71■□□□□ 0.59
PTCHD1Q96NR3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms