Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM11Q96F44 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
TRIM11Q96F44 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM11Q96F44 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM11Q96F44 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM11Q96F44 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM11Q96F44 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM11Q96F44 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM11Q96F44 CDCA4P2-201ENST00000441182 718 ntBASIC21.03■□□□□ 0.96
TRIM11Q96F44 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM11Q96F44 AC105036.2-201ENST00000569468 176 ntBASIC21.03■□□□□ 0.96
TRIM11Q96F44 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM11Q96F44 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM11Q96F44 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.03■□□□□ 0.96
TRIM11Q96F44 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM11Q96F44 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRIM11Q96F44 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM11Q96F44 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM11Q96F44 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM11Q96F44 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM11Q96F44 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM11Q96F44 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRIM11Q96F44 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM11Q96F44 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.02■□□□□ 0.96
TRIM11Q96F44 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM11Q96F44 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TRIM11Q96F44 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM11Q96F44 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.02■□□□□ 0.96
TRIM11Q96F44 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM11Q96F44 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM11Q96F44 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM11Q96F44 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM11Q96F44 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM11Q96F44 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM11Q96F44 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM11Q96F44 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
TRIM11Q96F44 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
TRIM11Q96F44 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM11Q96F44 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM11Q96F44 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM11Q96F44 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TRIM11Q96F44 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM11Q96F44 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM11Q96F44 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM11Q96F44 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM11Q96F44 PHGDH-210ENST00000641115 1638 ntBASIC21.01■□□□□ 0.95
TRIM11Q96F44 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM11Q96F44 MIR663A-201ENST00000385250 93 ntBASIC21.01■□□□□ 0.95
TRIM11Q96F44 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
TRIM11Q96F44 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.01■□□□□ 0.95
TRIM11Q96F44 AL050303.2-201ENST00000619798 666 ntBASIC21.01■□□□□ 0.95
TRIM11Q96F44 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM11Q96F44 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM11Q96F44 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TRIM11Q96F44 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM11Q96F44 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM11Q96F44 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM11Q96F44 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TRIM11Q96F44 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM11Q96F44 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM11Q96F44 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM11Q96F44 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21■□□□□ 0.95
TRIM11Q96F44 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM11Q96F44 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM11Q96F44 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRIM11Q96F44 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM11Q96F44 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM11Q96F44 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM11Q96F44 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21■□□□□ 0.95
TRIM11Q96F44 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21■□□□□ 0.95
TRIM11Q96F44 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21■□□□□ 0.95
TRIM11Q96F44 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21■□□□□ 0.95
TRIM11Q96F44 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21■□□□□ 0.95
TRIM11Q96F44 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21■□□□□ 0.95
TRIM11Q96F44 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21■□□□□ 0.95
TRIM11Q96F44 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM11Q96F44 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21■□□□□ 0.95
TRIM11Q96F44 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM11Q96F44 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM11Q96F44 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM11Q96F44 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM11Q96F44 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM11Q96F44 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM11Q96F44 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TRIM11Q96F44 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM11Q96F44 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TRIM11Q96F44 AL158211.5-201ENST00000623583 2518 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms