Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 TFP1-202ENST00000475455 1573 ntBASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 AC239809.2-201ENST00000415381 517 ntBASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 PRKY-204ENST00000533551 1019 ntBASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 AC018553.1-201ENST00000616682 1458 ntBASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.92■□□□□ 0.78
ECHDC3Q96DC8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 AL158047.1-201ENST00000445918 881 ntBASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 AL691432.2-201ENST00000607222 2038 ntBASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 AL391422.3-201ENST00000603791 2761 ntBASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC3Q96DC8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 KRASP1-201ENST00000407852 552 ntBASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.9■□□□□ 0.78
ECHDC3Q96DC8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms