Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ZNF428Q96B54 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ZNF428Q96B54 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZNF428Q96B54 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZNF428Q96B54 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ZNF428Q96B54 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZNF428Q96B54 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZNF428Q96B54 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZNF428Q96B54 BAALC-201ENST00000297574 801 ntTSL 3 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ZNF428Q96B54 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 AL023875.1-201ENST00000640777 796 ntBASIC25.61■■□□□ 1.69
ZNF428Q96B54 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC25.61■■□□□ 1.69
ZNF428Q96B54 ADM-207ENST00000530439 1839 ntTSL 2 BASIC25.6■■□□□ 1.69
ZNF428Q96B54 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.6■■□□□ 1.69
ZNF428Q96B54 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.6■■□□□ 1.69
ZNF428Q96B54 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
ZNF428Q96B54 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
ZNF428Q96B54 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 POM121L13P-201ENST00000422362 380 ntBASIC25.6■■□□□ 1.69
ZNF428Q96B54 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.6■■□□□ 1.69
ZNF428Q96B54 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.6■■□□□ 1.69
ZNF428Q96B54 Z99916.2-201ENST00000604037 246 ntBASIC25.6■■□□□ 1.69
ZNF428Q96B54 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC25.6■■□□□ 1.69
ZNF428Q96B54 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF428Q96B54 AC073130.3-201ENST00000624389 2278 ntBASIC25.6■■□□□ 1.69
ZNF428Q96B54 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZNF428Q96B54 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZNF428Q96B54 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZNF428Q96B54 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.59■■□□□ 1.69
ZNF428Q96B54 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.59■■□□□ 1.69
ZNF428Q96B54 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ZNF428Q96B54 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ZNF428Q96B54 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZNF428Q96B54 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
ZNF428Q96B54 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.59■■□□□ 1.69
ZNF428Q96B54 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.59■■□□□ 1.69
ZNF428Q96B54 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
ZNF428Q96B54 MOK-225ENST00000522867 1883 ntTSL 5 BASIC25.59■■□□□ 1.69
ZNF428Q96B54 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
ZNF428Q96B54 AL391422.3-201ENST00000603791 2761 ntBASIC25.59■■□□□ 1.69
ZNF428Q96B54 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
ZNF428Q96B54 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.59■■□□□ 1.69
ZNF428Q96B54 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZNF428Q96B54 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.58■■□□□ 1.69
ZNF428Q96B54 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC25.58■■□□□ 1.69
ZNF428Q96B54 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZNF428Q96B54 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC25.58■■□□□ 1.69
ZNF428Q96B54 AC009237.14-201ENST00000609975 1594 ntBASIC25.58■■□□□ 1.69
ZNF428Q96B54 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZNF428Q96B54 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC25.58■■□□□ 1.69
ZNF428Q96B54 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ZNF428Q96B54 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.58■■□□□ 1.69
ZNF428Q96B54 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
ZNF428Q96B54 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.58■■□□□ 1.69
ZNF428Q96B54 TMEM179-206ENST00000616017 1645 ntBASIC25.58■■□□□ 1.69
ZNF428Q96B54 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZNF428Q96B54 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ZNF428Q96B54 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.58■■□□□ 1.69
ZNF428Q96B54 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
ZNF428Q96B54 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ZNF428Q96B54 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZNF428Q96B54 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC25.57■■□□□ 1.68
ZNF428Q96B54 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZNF428Q96B54 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ZNF428Q96B54 AP001271.2-201ENST00000624018 1556 ntBASIC25.57■■□□□ 1.68
ZNF428Q96B54 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ZNF428Q96B54 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.57■■□□□ 1.68
ZNF428Q96B54 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZNF428Q96B54 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZNF428Q96B54 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.57■■□□□ 1.68
ZNF428Q96B54 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
ZNF428Q96B54 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZNF428Q96B54 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
ZNF428Q96B54 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC25.57■■□□□ 1.68
ZNF428Q96B54 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms