Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RNF34Q969K3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF34Q969K3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF34Q969K3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF34Q969K3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF34Q969K3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF34Q969K3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF34Q969K3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF34Q969K3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
RNF34Q969K3 AP003097.1-201ENST00000530657 1135 ntBASIC20.79■□□□□ 0.92
RNF34Q969K3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.79■□□□□ 0.92
RNF34Q969K3 MIR4651-201ENST00000582622 73 ntBASIC20.79■□□□□ 0.92
RNF34Q969K3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
RNF34Q969K3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF34Q969K3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF34Q969K3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF34Q969K3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF34Q969K3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF34Q969K3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF34Q969K3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RNF34Q969K3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF34Q969K3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF34Q969K3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF34Q969K3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RNF34Q969K3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF34Q969K3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF34Q969K3 ESRRAP1-201ENST00000400596 1257 ntBASIC20.78■□□□□ 0.92
RNF34Q969K3 FAM201B-201ENST00000458407 597 ntBASIC20.78■□□□□ 0.92
RNF34Q969K3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF34Q969K3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF34Q969K3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RNF34Q969K3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF34Q969K3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF34Q969K3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF34Q969K3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.78■□□□□ 0.92
RNF34Q969K3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF34Q969K3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF34Q969K3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF34Q969K3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF34Q969K3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF34Q969K3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RNF34Q969K3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF34Q969K3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF34Q969K3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF34Q969K3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF34Q969K3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF34Q969K3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF34Q969K3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF34Q969K3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RNF34Q969K3 TSPY20P-201ENST00000450910 630 ntBASIC20.77■□□□□ 0.92
RNF34Q969K3 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.77■□□□□ 0.92
RNF34Q969K3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF34Q969K3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF34Q969K3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF34Q969K3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RNF34Q969K3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF34Q969K3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF34Q969K3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF34Q969K3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
RNF34Q969K3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF34Q969K3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF34Q969K3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF34Q969K3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF34Q969K3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF34Q969K3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF34Q969K3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF34Q969K3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF34Q969K3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.77■□□□□ 0.91
RNF34Q969K3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF34Q969K3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
RNF34Q969K3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RNF34Q969K3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF34Q969K3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF34Q969K3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF34Q969K3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF34Q969K3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF34Q969K3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF34Q969K3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF34Q969K3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF34Q969K3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
RNF34Q969K3 AC026366.1-201ENST00000488803 879 ntBASIC20.76■□□□□ 0.91
RNF34Q969K3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF34Q969K3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF34Q969K3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF34Q969K3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RNF34Q969K3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF34Q969K3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF34Q969K3 AC008687.6-201ENST00000596318 630 ntBASIC20.76■□□□□ 0.91
RNF34Q969K3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RNF34Q969K3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF34Q969K3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF34Q969K3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
RNF34Q969K3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF34Q969K3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF34Q969K3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF34Q969K3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF34Q969K3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF34Q969K3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF34Q969K3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms