Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.99■■□□□ 1.75
RTF1Q92541 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.99■■□□□ 1.75
RTF1Q92541 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
RTF1Q92541 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTF1Q92541 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.98■■□□□ 1.75
RTF1Q92541 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTF1Q92541 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTF1Q92541 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTF1Q92541 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTF1Q92541 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.98■■□□□ 1.75
RTF1Q92541 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTF1Q92541 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
RTF1Q92541 TSPY7P-201ENST00000431358 1114 ntBASIC25.98■■□□□ 1.75
RTF1Q92541 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTF1Q92541 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTF1Q92541 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.98■■□□□ 1.75
RTF1Q92541 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.98■■□□□ 1.75
RTF1Q92541 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
RTF1Q92541 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
RTF1Q92541 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.98■■□□□ 1.75
RTF1Q92541 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
RTF1Q92541 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTF1Q92541 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.98■■□□□ 1.75
RTF1Q92541 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC25.98■■□□□ 1.75
RTF1Q92541 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTF1Q92541 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTF1Q92541 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
RTF1Q92541 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTF1Q92541 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RTF1Q92541 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
RTF1Q92541 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTF1Q92541 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTF1Q92541 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTF1Q92541 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTF1Q92541 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTF1Q92541 AC113410.3-201ENST00000623366 203 ntBASIC25.97■■□□□ 1.75
RTF1Q92541 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RTF1Q92541 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTF1Q92541 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
RTF1Q92541 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTF1Q92541 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.97■■□□□ 1.75
RTF1Q92541 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTF1Q92541 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC25.97■■□□□ 1.75
RTF1Q92541 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RTF1Q92541 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
RTF1Q92541 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTF1Q92541 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC25.96■■□□□ 1.75
RTF1Q92541 AC116351.2-201ENST00000606540 1585 ntBASIC25.96■■□□□ 1.75
RTF1Q92541 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTF1Q92541 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RTF1Q92541 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTF1Q92541 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
RTF1Q92541 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC25.96■■□□□ 1.75
RTF1Q92541 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTF1Q92541 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTF1Q92541 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
RTF1Q92541 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC25.96■■□□□ 1.75
RTF1Q92541 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTF1Q92541 AC020907.5-201ENST00000624372 1936 ntBASIC25.96■■□□□ 1.75
RTF1Q92541 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTF1Q92541 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTF1Q92541 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
RTF1Q92541 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
RTF1Q92541 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
RTF1Q92541 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTF1Q92541 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC25.95■■□□□ 1.74
RTF1Q92541 AL353807.1-201ENST00000427475 662 ntBASIC25.95■■□□□ 1.74
RTF1Q92541 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTF1Q92541 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RTF1Q92541 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.95■■□□□ 1.74
RTF1Q92541 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.95■■□□□ 1.74
RTF1Q92541 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.95■■□□□ 1.74
RTF1Q92541 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC25.95■■□□□ 1.74
RTF1Q92541 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.95■■□□□ 1.74
RTF1Q92541 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.95■■□□□ 1.74
RTF1Q92541 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.95■■□□□ 1.74
RTF1Q92541 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RTF1Q92541 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTF1Q92541 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTF1Q92541 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTF1Q92541 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.94■■□□□ 1.74
RTF1Q92541 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTF1Q92541 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
RTF1Q92541 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.94■■□□□ 1.74
RTF1Q92541 AF186192.3-201ENST00000583427 947 ntBASIC25.94■■□□□ 1.74
RTF1Q92541 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.94■■□□□ 1.74
RTF1Q92541 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RTF1Q92541 AP006587.1-201ENST00000534129 1502 ntBASIC25.93■■□□□ 1.74
RTF1Q92541 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTF1Q92541 KRT17P2-201ENST00000300992 1314 ntBASIC25.93■■□□□ 1.74
RTF1Q92541 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTF1Q92541 AC018553.1-201ENST00000616682 1458 ntBASIC25.93■■□□□ 1.74
RTF1Q92541 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RTF1Q92541 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
RTF1Q92541 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTF1Q92541 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTF1Q92541 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.93■■□□□ 1.74
RTF1Q92541 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.93■■□□□ 1.74
RTF1Q92541 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.93■■□□□ 1.74
RTF1Q92541 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.93■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms