Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 KRT16P6-202ENST00000425692 1426 ntBASIC20.12■□□□□ 0.81
PTCD2Q8WV60 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.12■□□□□ 0.81
PTCD2Q8WV60 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 STK33P1-201ENST00000423835 1218 ntBASIC20.11■□□□□ 0.81
PTCD2Q8WV60 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 AC023632.3-201ENST00000521633 145 ntBASIC20.11■□□□□ 0.81
PTCD2Q8WV60 C2orf69P4-201ENST00000565394 541 ntBASIC20.11■□□□□ 0.81
PTCD2Q8WV60 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCD2Q8WV60 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 POU5F1P3-201ENST00000428824 1078 ntBASIC20.1■□□□□ 0.81
PTCD2Q8WV60 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCD2Q8WV60 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 HLA-G-202ENST00000376815 851 ntBASIC20.09■□□□□ 0.81
PTCD2Q8WV60 HLA-G-203ENST00000376818 1127 ntBASIC20.09■□□□□ 0.81
PTCD2Q8WV60 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 TMEM191A-211ENST00000637163 1067 ntBASIC20.09■□□□□ 0.81
PTCD2Q8WV60 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCD2Q8WV60 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTCD2Q8WV60 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCD2Q8WV60 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms