Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CT55Q8WUE5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CT55Q8WUE5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CT55Q8WUE5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.59■□□□□ 0.57
CT55Q8WUE5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CT55Q8WUE5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.59■□□□□ 0.57
CT55Q8WUE5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CT55Q8WUE5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
CT55Q8WUE5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CT55Q8WUE5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CT55Q8WUE5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CT55Q8WUE5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CT55Q8WUE5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CT55Q8WUE5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CT55Q8WUE5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CT55Q8WUE5 KRT16P6-202ENST00000425692 1426 ntBASIC18.58■□□□□ 0.57
CT55Q8WUE5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CT55Q8WUE5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
CT55Q8WUE5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.58■□□□□ 0.57
CT55Q8WUE5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CT55Q8WUE5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CT55Q8WUE5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.58■□□□□ 0.56
CT55Q8WUE5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.58■□□□□ 0.56
CT55Q8WUE5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.58■□□□□ 0.56
CT55Q8WUE5 TMPOP1-202ENST00000424642 1267 ntBASIC18.58■□□□□ 0.56
CT55Q8WUE5 AL390955.1-201ENST00000428694 934 ntBASIC18.58■□□□□ 0.56
CT55Q8WUE5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.58■□□□□ 0.56
CT55Q8WUE5 AC116562.2-201ENST00000507042 360 ntBASIC18.58■□□□□ 0.56
CT55Q8WUE5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.58■□□□□ 0.56
CT55Q8WUE5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.58■□□□□ 0.56
CT55Q8WUE5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.58■□□□□ 0.56
CT55Q8WUE5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.58■□□□□ 0.56
CT55Q8WUE5 RN7SL850P-201ENST00000579959 291 ntBASIC18.58■□□□□ 0.56
CT55Q8WUE5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.58■□□□□ 0.56
CT55Q8WUE5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CT55Q8WUE5 AC116351.2-201ENST00000606540 1585 ntBASIC18.58■□□□□ 0.56
CT55Q8WUE5 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.58■□□□□ 0.56
CT55Q8WUE5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.58■□□□□ 0.56
CT55Q8WUE5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CT55Q8WUE5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CT55Q8WUE5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.57■□□□□ 0.56
CT55Q8WUE5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CT55Q8WUE5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
CT55Q8WUE5 AC092720.2-201ENST00000602388 1665 ntBASIC18.57■□□□□ 0.56
CT55Q8WUE5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CT55Q8WUE5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CT55Q8WUE5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CT55Q8WUE5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CT55Q8WUE5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CT55Q8WUE5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CT55Q8WUE5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CT55Q8WUE5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.57■□□□□ 0.56
CT55Q8WUE5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.57■□□□□ 0.56
CT55Q8WUE5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.57■□□□□ 0.56
CT55Q8WUE5 C1QL1P1-201ENST00000568105 661 ntBASIC18.57■□□□□ 0.56
CT55Q8WUE5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.57■□□□□ 0.56
CT55Q8WUE5 AC145285.6-201ENST00000604632 637 ntBASIC18.57■□□□□ 0.56
CT55Q8WUE5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.57■□□□□ 0.56
CT55Q8WUE5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.57■□□□□ 0.56
CT55Q8WUE5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.57■□□□□ 0.56
CT55Q8WUE5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.57■□□□□ 0.56
CT55Q8WUE5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CT55Q8WUE5 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.57■□□□□ 0.56
CT55Q8WUE5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CT55Q8WUE5 AC026310.3-201ENST00000625186 2373 ntBASIC18.56■□□□□ 0.56
CT55Q8WUE5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CT55Q8WUE5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.56■□□□□ 0.56
CT55Q8WUE5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
CT55Q8WUE5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.56■□□□□ 0.56
CT55Q8WUE5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.56■□□□□ 0.56
CT55Q8WUE5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.56■□□□□ 0.56
CT55Q8WUE5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.56■□□□□ 0.56
CT55Q8WUE5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CT55Q8WUE5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CT55Q8WUE5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CT55Q8WUE5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.56■□□□□ 0.56
CT55Q8WUE5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CT55Q8WUE5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CT55Q8WUE5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CT55Q8WUE5 TFP1-202ENST00000475455 1573 ntBASIC18.55■□□□□ 0.56
CT55Q8WUE5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.55■□□□□ 0.56
CT55Q8WUE5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CT55Q8WUE5 LINC00565-201ENST00000562710 2331 ntBASIC18.55■□□□□ 0.56
CT55Q8WUE5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CT55Q8WUE5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CT55Q8WUE5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.55■□□□□ 0.56
CT55Q8WUE5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CT55Q8WUE5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.55■□□□□ 0.56
CT55Q8WUE5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CT55Q8WUE5 AC018553.1-201ENST00000616682 1458 ntBASIC18.55■□□□□ 0.56
CT55Q8WUE5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.55■□□□□ 0.56
CT55Q8WUE5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.55■□□□□ 0.56
CT55Q8WUE5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.55■□□□□ 0.56
CT55Q8WUE5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.55■□□□□ 0.56
CT55Q8WUE5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CT55Q8WUE5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CT55Q8WUE5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CT55Q8WUE5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CT55Q8WUE5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CT55Q8WUE5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms