Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF139Q8WU17 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNF139Q8WU17 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.89■□□□□ 0.94
RNF139Q8WU17 AC073130.3-201ENST00000624389 2278 ntBASIC20.89■□□□□ 0.94
RNF139Q8WU17 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF139Q8WU17 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.89■□□□□ 0.94
RNF139Q8WU17 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
RNF139Q8WU17 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNF139Q8WU17 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.89■□□□□ 0.94
RNF139Q8WU17 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF139Q8WU17 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF139Q8WU17 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF139Q8WU17 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF139Q8WU17 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF139Q8WU17 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.89■□□□□ 0.93
RNF139Q8WU17 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF139Q8WU17 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF139Q8WU17 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF139Q8WU17 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF139Q8WU17 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF139Q8WU17 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF139Q8WU17 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF139Q8WU17 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF139Q8WU17 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RNF139Q8WU17 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF139Q8WU17 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RNF139Q8WU17 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF139Q8WU17 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RNF139Q8WU17 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF139Q8WU17 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF139Q8WU17 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RNF139Q8WU17 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF139Q8WU17 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF139Q8WU17 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF139Q8WU17 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF139Q8WU17 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF139Q8WU17 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF139Q8WU17 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF139Q8WU17 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF139Q8WU17 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF139Q8WU17 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF139Q8WU17 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF139Q8WU17 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF139Q8WU17 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF139Q8WU17 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF139Q8WU17 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF139Q8WU17 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF139Q8WU17 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RNF139Q8WU17 KRT16P6-202ENST00000425692 1426 ntBASIC20.87■□□□□ 0.93
RNF139Q8WU17 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF139Q8WU17 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF139Q8WU17 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF139Q8WU17 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF139Q8WU17 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 RPS2P52-201ENST00000469610 820 ntBASIC20.86■□□□□ 0.93
RNF139Q8WU17 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF139Q8WU17 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF139Q8WU17 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF139Q8WU17 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF139Q8WU17 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF139Q8WU17 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF139Q8WU17 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF139Q8WU17 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF139Q8WU17 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF139Q8WU17 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF139Q8WU17 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF139Q8WU17 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF139Q8WU17 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF139Q8WU17 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF139Q8WU17 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF139Q8WU17 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF139Q8WU17 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF139Q8WU17 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF139Q8WU17 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF139Q8WU17 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF139Q8WU17 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF139Q8WU17 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF139Q8WU17 AC069544.1-201ENST00000609399 999 ntBASIC20.85■□□□□ 0.93
RNF139Q8WU17 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF139Q8WU17 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF139Q8WU17 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF139Q8WU17 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RNF139Q8WU17 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF139Q8WU17 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
RNF139Q8WU17 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF139Q8WU17 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF139Q8WU17 AC099778.1-201ENST00000568593 1911 ntBASIC20.84■□□□□ 0.93
RNF139Q8WU17 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms