Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SNED1Q8TER0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SNED1Q8TER0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SNED1Q8TER0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SNED1Q8TER0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
SNED1Q8TER0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SNED1Q8TER0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
SNED1Q8TER0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.35■■□□□ 1.49
SNED1Q8TER0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.35■■□□□ 1.49
SNED1Q8TER0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.35■■□□□ 1.49
SNED1Q8TER0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC24.35■■□□□ 1.49
SNED1Q8TER0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
SNED1Q8TER0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNED1Q8TER0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
SNED1Q8TER0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNED1Q8TER0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SNED1Q8TER0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNED1Q8TER0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNED1Q8TER0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNED1Q8TER0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.34■■□□□ 1.49
SNED1Q8TER0 AC117947.1-201ENST00000427448 529 ntBASIC24.34■■□□□ 1.49
SNED1Q8TER0 NMU-205ENST00000511469 756 ntTSL 3 BASIC24.34■■□□□ 1.49
SNED1Q8TER0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC24.34■■□□□ 1.49
SNED1Q8TER0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.34■■□□□ 1.49
SNED1Q8TER0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNED1Q8TER0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNED1Q8TER0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNED1Q8TER0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNED1Q8TER0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNED1Q8TER0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.33■■□□□ 1.49
SNED1Q8TER0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SNED1Q8TER0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.33■■□□□ 1.49
SNED1Q8TER0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNED1Q8TER0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SNED1Q8TER0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.33■■□□□ 1.49
SNED1Q8TER0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
SNED1Q8TER0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC24.33■■□□□ 1.49
SNED1Q8TER0 FAM8A6P-201ENST00000407496 1135 ntBASIC24.33■■□□□ 1.49
SNED1Q8TER0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.33■■□□□ 1.49
SNED1Q8TER0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.33■■□□□ 1.49
SNED1Q8TER0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC24.33■■□□□ 1.49
SNED1Q8TER0 AL358472.4-201ENST00000633140 710 ntBASIC24.33■■□□□ 1.49
SNED1Q8TER0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.33■■□□□ 1.49
SNED1Q8TER0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.33■■□□□ 1.48
SNED1Q8TER0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.33■■□□□ 1.48
SNED1Q8TER0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SNED1Q8TER0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNED1Q8TER0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNED1Q8TER0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SNED1Q8TER0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SNED1Q8TER0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNED1Q8TER0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNED1Q8TER0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNED1Q8TER0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC24.32■■□□□ 1.48
SNED1Q8TER0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC24.32■■□□□ 1.48
SNED1Q8TER0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.32■■□□□ 1.48
SNED1Q8TER0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SNED1Q8TER0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC24.32■■□□□ 1.48
SNED1Q8TER0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC24.32■■□□□ 1.48
SNED1Q8TER0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNED1Q8TER0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.32■■□□□ 1.48
SNED1Q8TER0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SNED1Q8TER0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SNED1Q8TER0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SNED1Q8TER0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SNED1Q8TER0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SNED1Q8TER0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNED1Q8TER0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNED1Q8TER0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.31■■□□□ 1.48
SNED1Q8TER0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC24.31■■□□□ 1.48
SNED1Q8TER0 KRT18P16-201ENST00000510337 1294 ntBASIC24.31■■□□□ 1.48
SNED1Q8TER0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.31■■□□□ 1.48
SNED1Q8TER0 AL138966.2-201ENST00000621997 464 ntBASIC24.31■■□□□ 1.48
SNED1Q8TER0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
SNED1Q8TER0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNED1Q8TER0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.31■■□□□ 1.48
SNED1Q8TER0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNED1Q8TER0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.31■■□□□ 1.48
SNED1Q8TER0 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.31■■□□□ 1.48
SNED1Q8TER0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
SNED1Q8TER0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNED1Q8TER0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNED1Q8TER0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.3■■□□□ 1.48
SNED1Q8TER0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNED1Q8TER0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNED1Q8TER0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC24.3■■□□□ 1.48
SNED1Q8TER0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC24.3■■□□□ 1.48
SNED1Q8TER0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNED1Q8TER0 AC091390.4-202ENST00000476426 537 ntBASIC24.3■■□□□ 1.48
SNED1Q8TER0 GRAMD4P8-201ENST00000605465 1115 ntBASIC24.3■■□□□ 1.48
SNED1Q8TER0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNED1Q8TER0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNED1Q8TER0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNED1Q8TER0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNED1Q8TER0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SNED1Q8TER0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNED1Q8TER0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNED1Q8TER0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SNED1Q8TER0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNED1Q8TER0 AC116351.2-201ENST00000606540 1585 ntBASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms