Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 REXO1L12P-201ENST00000622156 912 ntBASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 AC007225.1-201ENST00000566331 1836 ntBASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 BX088651.1-201ENST00000540551 451 ntBASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 DPP3P2-201ENST00000416030 1696 ntBASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3RF2Q8TEC5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 AF186192.3-201ENST00000583427 947 ntBASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3RF2Q8TEC5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 TSPY15P-201ENST00000457163 923 ntBASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SH3RF2Q8TEC5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SH3RF2Q8TEC5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.64■□□□□ 0.9
SH3RF2Q8TEC5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH3RF2Q8TEC5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
SH3RF2Q8TEC5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SH3RF2Q8TEC5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.64■□□□□ 0.9
SH3RF2Q8TEC5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH3RF2Q8TEC5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.64■□□□□ 0.9
SH3RF2Q8TEC5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH3RF2Q8TEC5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SH3RF2Q8TEC5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 AC211429.1-201ENST00000415277 523 ntBASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 ECEL1P3-201ENST00000427961 737 ntBASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 AC004264.1-201ENST00000608354 794 ntBASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH3RF2Q8TEC5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms