Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 RPPH1-201ENST00000516869 333 ntBASIC20.2■□□□□ 0.82
CHD5Q8TDI0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CHD5Q8TDI0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD5Q8TDI0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD5Q8TDI0 KRASP1-201ENST00000407852 552 ntBASIC20.17■□□□□ 0.82
CHD5Q8TDI0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 AL353708.3-201ENST00000610272 989 ntBASIC20.17■□□□□ 0.82
CHD5Q8TDI0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 AC112907.3-201ENST00000577781 2400 ntBASIC20.17■□□□□ 0.82
CHD5Q8TDI0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 KRT18P29-201ENST00000397031 1267 ntBASIC20.17■□□□□ 0.82
CHD5Q8TDI0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 FAM197Y4-202ENST00000622692 608 ntBASIC20.17■□□□□ 0.82
CHD5Q8TDI0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD5Q8TDI0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms