Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 PHGDH-210ENST00000641115 1638 ntBASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 AC098590.1-201ENST00000468126 897 ntBASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 RN7SL471P-201ENST00000580476 299 ntBASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 AL121829.2-201ENST00000620908 328 ntBASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01555Q8NAE3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 AC116351.2-201ENST00000606540 1585 ntBASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01555Q8NAE3 AC018553.1-201ENST00000616682 1458 ntBASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 AL121906.2-201ENST00000621597 723 ntBASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01555Q8NAE3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01555Q8NAE3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LINC01555Q8NAE3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LINC01555Q8NAE3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.14■□□□□ 0.66
LINC01555Q8NAE3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 TFP1-202ENST00000475455 1573 ntBASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms