Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 AC233263.1-201ENST00000578059 224 ntBASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 GCSHP5-201ENST00000443090 522 ntBASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 RN7SL471P-201ENST00000580476 299 ntBASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH20Q8N6Y1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 RPS2P52-201ENST00000469610 820 ntBASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
PCDH20Q8N6Y1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 AC142381.4-202ENST00000563973 229 ntBASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCDH20Q8N6Y1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 MTDHP1-201ENST00000605323 784 ntBASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH20Q8N6Y1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms