Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 AL391422.3-201ENST00000603791 2761 ntBASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 RN7SL471P-201ENST00000580476 299 ntBASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 PRORSD1P-201ENST00000295112 541 ntBASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 PRKY-204ENST00000533551 1019 ntBASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAM1L1Q8N609 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 AC018553.1-201ENST00000616682 1458 ntBASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAM1L1Q8N609 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 AL691432.2-201ENST00000607222 2038 ntBASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAM1L1Q8N609 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms