Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 TSPY6P-201ENST00000448518 926 ntBASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 AC092118.2-201ENST00000613495 667 ntBASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TTC9CQ8N5M4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 TMEM179-206ENST00000616017 1645 ntBASIC15.71■□□□□ 0.11
TTC9CQ8N5M4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TTC9CQ8N5M4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TTC9CQ8N5M4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 GUSBP6-202ENST00000438529 1198 ntBASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 MIR4758-201ENST00000577688 71 ntBASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC9CQ8N5M4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC9CQ8N5M4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms