Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01561Q8N1V8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01561Q8N1V8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
LINC01561Q8N1V8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 PTBP1P-201ENST00000554374 1601 ntBASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 AC007322.4-201ENST00000509611 723 ntBASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LINC01561Q8N1V8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 HLA-G-202ENST00000376815 851 ntBASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 HLA-G-203ENST00000376818 1127 ntBASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 KRT18P14-201ENST00000534205 1250 ntBASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 MYCNOS-205ENST00000641950 531 ntBASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC01561Q8N1V8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 AC004854.2-201ENST00000608450 1441 ntBASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms