Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.55■■□□□ 1.04
VPS52Q8N1B4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
VPS52Q8N1B4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.55■■□□□ 1.04
VPS52Q8N1B4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
VPS52Q8N1B4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS52Q8N1B4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS52Q8N1B4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS52Q8N1B4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS52Q8N1B4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS52Q8N1B4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS52Q8N1B4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS52Q8N1B4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
VPS52Q8N1B4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 AL049796.1-201ENST00000565336 1766 ntBASIC21.54■■□□□ 1.04
VPS52Q8N1B4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 KRT18P21-201ENST00000515767 1272 ntBASIC21.54■■□□□ 1.04
VPS52Q8N1B4 AL121603.2-201ENST00000557373 2117 ntBASIC21.54■■□□□ 1.04
VPS52Q8N1B4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 AC133561.5-201ENST00000635547 218 ntBASIC21.54■■□□□ 1.04
VPS52Q8N1B4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS52Q8N1B4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 AC087499.1-201ENST00000418141 1075 ntBASIC21.53■■□□□ 1.04
VPS52Q8N1B4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 AL355075.4-201ENST00000554988 638 ntBASIC21.53■■□□□ 1.04
VPS52Q8N1B4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 AL121829.2-201ENST00000620908 328 ntBASIC21.53■■□□□ 1.04
VPS52Q8N1B4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS52Q8N1B4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 AC027702.1-201ENST00000563810 1770 ntBASIC21.52■■□□□ 1.04
VPS52Q8N1B4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 AC023632.3-201ENST00000521633 145 ntBASIC21.52■■□□□ 1.04
VPS52Q8N1B4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.52■■□□□ 1.04
VPS52Q8N1B4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VPS52Q8N1B4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
VPS52Q8N1B4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.52■■□□□ 1.03
VPS52Q8N1B4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 AC124283.5-201ENST00000624661 1809 ntBASIC21.51■■□□□ 1.03
VPS52Q8N1B4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms