Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX5Q8N196 TSPY14P-201ENST00000303979 915 ntBASIC20.39■□□□□ 0.85
SIX5Q8N196 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX5Q8N196 BX664615.1-201ENST00000443558 458 ntBASIC20.39■□□□□ 0.85
SIX5Q8N196 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SIX5Q8N196 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX5Q8N196 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.39■□□□□ 0.85
SIX5Q8N196 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX5Q8N196 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SIX5Q8N196 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX5Q8N196 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.39■□□□□ 0.85
SIX5Q8N196 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX5Q8N196 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.38■□□□□ 0.85
SIX5Q8N196 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
SIX5Q8N196 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.38■□□□□ 0.85
SIX5Q8N196 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX5Q8N196 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX5Q8N196 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX5Q8N196 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.38■□□□□ 0.85
SIX5Q8N196 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.38■□□□□ 0.85
SIX5Q8N196 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SIX5Q8N196 AC011484.1-201ENST00000377652 1995 ntBASIC20.38■□□□□ 0.85
SIX5Q8N196 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIX5Q8N196 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX5Q8N196 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.38■□□□□ 0.85
SIX5Q8N196 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.38■□□□□ 0.85
SIX5Q8N196 AC063952.2-201ENST00000498792 1227 ntBASIC20.38■□□□□ 0.85
SIX5Q8N196 KRT18P56-201ENST00000507275 550 ntBASIC20.38■□□□□ 0.85
SIX5Q8N196 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX5Q8N196 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SIX5Q8N196 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX5Q8N196 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.38■□□□□ 0.85
SIX5Q8N196 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SIX5Q8N196 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX5Q8N196 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX5Q8N196 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.38■□□□□ 0.85
SIX5Q8N196 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX5Q8N196 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX5Q8N196 KRT8P36-201ENST00000489121 1440 ntBASIC20.37■□□□□ 0.85
SIX5Q8N196 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX5Q8N196 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SIX5Q8N196 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX5Q8N196 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SIX5Q8N196 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIX5Q8N196 MESTP1-201ENST00000404287 994 ntBASIC20.37■□□□□ 0.85
SIX5Q8N196 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.37■□□□□ 0.85
SIX5Q8N196 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.37■□□□□ 0.85
SIX5Q8N196 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.37■□□□□ 0.85
SIX5Q8N196 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.37■□□□□ 0.85
SIX5Q8N196 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SIX5Q8N196 KRT126P-201ENST00000549467 1181 ntBASIC20.37■□□□□ 0.85
SIX5Q8N196 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.37■□□□□ 0.85
SIX5Q8N196 AP005242.2-201ENST00000580065 1175 ntBASIC20.37■□□□□ 0.85
SIX5Q8N196 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SIX5Q8N196 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.37■□□□□ 0.85
SIX5Q8N196 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX5Q8N196 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SIX5Q8N196 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX5Q8N196 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.37■□□□□ 0.85
SIX5Q8N196 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX5Q8N196 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.37■□□□□ 0.85
SIX5Q8N196 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX5Q8N196 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
SIX5Q8N196 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.36■□□□□ 0.85
SIX5Q8N196 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.36■□□□□ 0.85
SIX5Q8N196 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.36■□□□□ 0.85
SIX5Q8N196 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.36■□□□□ 0.85
SIX5Q8N196 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SIX5Q8N196 AC128688.1-201ENST00000487626 519 ntBASIC20.36■□□□□ 0.85
SIX5Q8N196 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.36■□□□□ 0.85
SIX5Q8N196 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.36■□□□□ 0.85
SIX5Q8N196 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.36■□□□□ 0.85
SIX5Q8N196 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.36■□□□□ 0.85
SIX5Q8N196 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.36■□□□□ 0.85
SIX5Q8N196 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SIX5Q8N196 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SIX5Q8N196 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SIX5Q8N196 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.35■□□□□ 0.85
SIX5Q8N196 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SIX5Q8N196 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIX5Q8N196 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SIX5Q8N196 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
SIX5Q8N196 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX5Q8N196 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SIX5Q8N196 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.35■□□□□ 0.85
SIX5Q8N196 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX5Q8N196 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX5Q8N196 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms