Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF440Q8IYI8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF440Q8IYI8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 AL390719.1-204ENST00000412397 1219 ntBASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 MIR4758-201ENST00000577688 71 ntBASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 PCDHAC2-203ENST00000615316 3011 ntBASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF440Q8IYI8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 TSPY6P-201ENST00000448518 926 ntBASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 PHGDH-210ENST00000641115 1638 ntBASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF440Q8IYI8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 DUSP5P2-201ENST00000426873 1033 ntBASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 AC073210.2-201ENST00000430369 194 ntBASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 AC092666.2-201ENST00000613287 246 ntBASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF440Q8IYI8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.16■□□□□ 0.5
ZNF440Q8IYI8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms